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16-nbd-16:0 coenzyme a  (Avanti Polar)


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    Structured Review

    Avanti Polar 16-nbd-16:0 coenzyme a
    16 Nbd 16:0 Coenzyme A, supplied by Avanti Polar, used in various techniques. Bioz Stars score: 94/100, based on 20 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/16-nbd-16:0 coenzyme a/product/Avanti Polar
    Average 94 stars, based on 20 article reviews
    16-nbd-16:0 coenzyme a - by Bioz Stars, 2026-02
    94/100 stars

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    High-throughput screen (HTS) for the discovery of chemical compounds modulating human zDHHC2 autoacylation activity: TR-FRET-based assay. A , experimental design of the HTS. HA-tagged zDHHC2 enzyme expressed at the surface of lipoparticles was incubated for 15 min at room temperature (RT) with <t>NBD-tagged</t> <t>palmitoyl-CoA</t> and an anti-HA antibody coupled to terbium (Tb) cryptate. Autoacylation of zDHHC2 on its catalytic cysteine brings closer the FRET donor Tb cryptate bound to the anti-HA antibody to the NBD fluorophore coupled to the palmitate and triggers FRET that can be followed over time (time-resolved FRET [TR-FRET]). B , TR-FRET was measured with increasing concentrations of NBD-palmitoyl-CoA (NBD-C16:0-CoA) and either WT zDHHC2 ( left panel ) or catalytically dead zDHHC2 C157S ( right panel ) over a period of 35 min. C , experimental conditions of the HTS screen. About 350,000 compounds were incubated individually in 1536-well plates at a concentration of 4.2 μM with zDHHC2 lipoparticles (42 μg/ml stock) for a few minutes before the addition of a mix containing the Tb cryptate–tagged anti-HA antibody (1:200 dilution) and 1 μM of NBD-palmitoyl-CoA (NBD-C16:0-CoA). TR-FRET was measured after a 15 min incubation at room temperature on a Biotek Synergy Neo apparatus. Results are given as a ratio between the FRET signal measured over a background baseline. D , histogram representation of ONO library screen showing the percentage of activity of zDHHC2 (as measured by TR-FRET) in the presence of each compound. The graph represents the number of compounds that are either activating (0 to 100) or inhibiting (0 to −100) zDHHC2 activity. HA, hemagglutinin; NBD, nitrobenzoxadiazole; TR-FRET, time-resolved FRET; zDHHC, zinc finger DHHC domain–containing protein.
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    High-throughput screen (HTS) for the discovery of chemical compounds modulating human zDHHC2 autoacylation activity: TR-FRET-based assay. A , experimental design of the HTS. HA-tagged zDHHC2 enzyme expressed at the surface of lipoparticles was incubated for 15 min at room temperature (RT) with <t>NBD-tagged</t> <t>palmitoyl-CoA</t> and an anti-HA antibody coupled to terbium (Tb) cryptate. Autoacylation of zDHHC2 on its catalytic cysteine brings closer the FRET donor Tb cryptate bound to the anti-HA antibody to the NBD fluorophore coupled to the palmitate and triggers FRET that can be followed over time (time-resolved FRET [TR-FRET]). B , TR-FRET was measured with increasing concentrations of NBD-palmitoyl-CoA (NBD-C16:0-CoA) and either WT zDHHC2 ( left panel ) or catalytically dead zDHHC2 C157S ( right panel ) over a period of 35 min. C , experimental conditions of the HTS screen. About 350,000 compounds were incubated individually in 1536-well plates at a concentration of 4.2 μM with zDHHC2 lipoparticles (42 μg/ml stock) for a few minutes before the addition of a mix containing the Tb cryptate–tagged anti-HA antibody (1:200 dilution) and 1 μM of NBD-palmitoyl-CoA (NBD-C16:0-CoA). TR-FRET was measured after a 15 min incubation at room temperature on a Biotek Synergy Neo apparatus. Results are given as a ratio between the FRET signal measured over a background baseline. D , histogram representation of ONO library screen showing the percentage of activity of zDHHC2 (as measured by TR-FRET) in the presence of each compound. The graph represents the number of compounds that are either activating (0 to 100) or inhibiting (0 to −100) zDHHC2 activity. HA, hemagglutinin; NBD, nitrobenzoxadiazole; TR-FRET, time-resolved FRET; zDHHC, zinc finger DHHC domain–containing protein.
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    High-throughput screen (HTS) for the discovery of chemical compounds modulating human zDHHC2 autoacylation activity: TR-FRET-based assay. A , experimental design of the HTS. HA-tagged zDHHC2 enzyme expressed at the surface of lipoparticles was incubated for 15 min at room temperature (RT) with <t>NBD-tagged</t> <t>palmitoyl-CoA</t> and an anti-HA antibody coupled to terbium (Tb) cryptate. Autoacylation of zDHHC2 on its catalytic cysteine brings closer the FRET donor Tb cryptate bound to the anti-HA antibody to the NBD fluorophore coupled to the palmitate and triggers FRET that can be followed over time (time-resolved FRET [TR-FRET]). B , TR-FRET was measured with increasing concentrations of NBD-palmitoyl-CoA (NBD-C16:0-CoA) and either WT zDHHC2 ( left panel ) or catalytically dead zDHHC2 C157S ( right panel ) over a period of 35 min. C , experimental conditions of the HTS screen. About 350,000 compounds were incubated individually in 1536-well plates at a concentration of 4.2 μM with zDHHC2 lipoparticles (42 μg/ml stock) for a few minutes before the addition of a mix containing the Tb cryptate–tagged anti-HA antibody (1:200 dilution) and 1 μM of NBD-palmitoyl-CoA (NBD-C16:0-CoA). TR-FRET was measured after a 15 min incubation at room temperature on a Biotek Synergy Neo apparatus. Results are given as a ratio between the FRET signal measured over a background baseline. D , histogram representation of ONO library screen showing the percentage of activity of zDHHC2 (as measured by TR-FRET) in the presence of each compound. The graph represents the number of compounds that are either activating (0 to 100) or inhibiting (0 to −100) zDHHC2 activity. HA, hemagglutinin; NBD, nitrobenzoxadiazole; TR-FRET, time-resolved FRET; zDHHC, zinc finger DHHC domain–containing protein.
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    CerS activity was assayed using 20 μg of protein from homogenates from the indicated tissues, and <t>C16:0-CoA</t> was used as substrate. Data are means ± S.D., n = 4. No significant differences were detected.
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    CerS activity was assayed using 20 μg of protein from homogenates from the indicated tissues, and <t>C16:0-CoA</t> was used as substrate. Data are means ± S.D., n = 4. No significant differences were detected.
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    Image Search Results


    High-throughput screen (HTS) for the discovery of chemical compounds modulating human zDHHC2 autoacylation activity: TR-FRET-based assay. A , experimental design of the HTS. HA-tagged zDHHC2 enzyme expressed at the surface of lipoparticles was incubated for 15 min at room temperature (RT) with NBD-tagged palmitoyl-CoA and an anti-HA antibody coupled to terbium (Tb) cryptate. Autoacylation of zDHHC2 on its catalytic cysteine brings closer the FRET donor Tb cryptate bound to the anti-HA antibody to the NBD fluorophore coupled to the palmitate and triggers FRET that can be followed over time (time-resolved FRET [TR-FRET]). B , TR-FRET was measured with increasing concentrations of NBD-palmitoyl-CoA (NBD-C16:0-CoA) and either WT zDHHC2 ( left panel ) or catalytically dead zDHHC2 C157S ( right panel ) over a period of 35 min. C , experimental conditions of the HTS screen. About 350,000 compounds were incubated individually in 1536-well plates at a concentration of 4.2 μM with zDHHC2 lipoparticles (42 μg/ml stock) for a few minutes before the addition of a mix containing the Tb cryptate–tagged anti-HA antibody (1:200 dilution) and 1 μM of NBD-palmitoyl-CoA (NBD-C16:0-CoA). TR-FRET was measured after a 15 min incubation at room temperature on a Biotek Synergy Neo apparatus. Results are given as a ratio between the FRET signal measured over a background baseline. D , histogram representation of ONO library screen showing the percentage of activity of zDHHC2 (as measured by TR-FRET) in the presence of each compound. The graph represents the number of compounds that are either activating (0 to 100) or inhibiting (0 to −100) zDHHC2 activity. HA, hemagglutinin; NBD, nitrobenzoxadiazole; TR-FRET, time-resolved FRET; zDHHC, zinc finger DHHC domain–containing protein.

    Journal: The Journal of Biological Chemistry

    Article Title: Development of a novel high-throughput screen for the identification of new inhibitors of protein S-acylation

    doi: 10.1016/j.jbc.2022.102469

    Figure Lengend Snippet: High-throughput screen (HTS) for the discovery of chemical compounds modulating human zDHHC2 autoacylation activity: TR-FRET-based assay. A , experimental design of the HTS. HA-tagged zDHHC2 enzyme expressed at the surface of lipoparticles was incubated for 15 min at room temperature (RT) with NBD-tagged palmitoyl-CoA and an anti-HA antibody coupled to terbium (Tb) cryptate. Autoacylation of zDHHC2 on its catalytic cysteine brings closer the FRET donor Tb cryptate bound to the anti-HA antibody to the NBD fluorophore coupled to the palmitate and triggers FRET that can be followed over time (time-resolved FRET [TR-FRET]). B , TR-FRET was measured with increasing concentrations of NBD-palmitoyl-CoA (NBD-C16:0-CoA) and either WT zDHHC2 ( left panel ) or catalytically dead zDHHC2 C157S ( right panel ) over a period of 35 min. C , experimental conditions of the HTS screen. About 350,000 compounds were incubated individually in 1536-well plates at a concentration of 4.2 μM with zDHHC2 lipoparticles (42 μg/ml stock) for a few minutes before the addition of a mix containing the Tb cryptate–tagged anti-HA antibody (1:200 dilution) and 1 μM of NBD-palmitoyl-CoA (NBD-C16:0-CoA). TR-FRET was measured after a 15 min incubation at room temperature on a Biotek Synergy Neo apparatus. Results are given as a ratio between the FRET signal measured over a background baseline. D , histogram representation of ONO library screen showing the percentage of activity of zDHHC2 (as measured by TR-FRET) in the presence of each compound. The graph represents the number of compounds that are either activating (0 to 100) or inhibiting (0 to −100) zDHHC2 activity. HA, hemagglutinin; NBD, nitrobenzoxadiazole; TR-FRET, time-resolved FRET; zDHHC, zinc finger DHHC domain–containing protein.

    Article Snippet: Palmitoyl-CoA-NBD (catalog no.: 810705) was purchased from Avanti Polar Lipids.

    Techniques: High Throughput Screening Assay, Activity Assay, Incubation, Concentration Assay

    CerS activity was assayed using 20 μg of protein from homogenates from the indicated tissues, and C16:0-CoA was used as substrate. Data are means ± S.D., n = 4. No significant differences were detected.

    Journal: PLoS ONE

    Article Title: Generation of a ceramide synthase 6 mouse lacking the DDRSDIE C-terminal motif

    doi: 10.1371/journal.pone.0271675

    Figure Lengend Snippet: CerS activity was assayed using 20 μg of protein from homogenates from the indicated tissues, and C16:0-CoA was used as substrate. Data are means ± S.D., n = 4. No significant differences were detected.

    Article Snippet: NBD-sphinganine and palmitoyl-CoA (C16-CoA) were from Avanti Polar Lipids (Alabaster, AL).

    Techniques: Activity Assay